Dr. Bharat Kwatra Comp. Precision Oncology
Genitourinary

Penile Cancer

Penile cancer is uncommon in most of the world but carries a higher incidence in parts of South Asia, South America and Africa. HPV status divides it into two groups with somewhat different behaviour.

Disease categories

Major disease categories

  • Penile squamous cell carcinoma
  • HPV-associated subtypes
  • Non-HPV-associated subtypes
  • Penile melanoma

Molecular

Molecular considerations

HPV status divides the disease. TP53 and CDKN2A alterations are described in HPV-independent tumours. PD-L1 expression is assessed in advanced disease.

Fig. 1 · Biomarker panel 4 markers

Markers commonly discussed in penile cancer

  • HPV / p16
  • TP53
  • CDKN2A
  • PD-L1

Not exhaustive, and not every marker is assessed in every patient. Which of these is relevant depends on the individual case and should be discussed with the treating team.

Testing

Genomic testing considerations

Profiling is discussed in advanced and recurrent disease.

Germline

Germline considerations

Not routinely indicated.

Cancer genetics and hereditary risk

Molecular monitoring

ctDNA and liquid biopsy considerations

Investigational.

More on ctDNA

Single-cell & computation

Single-cell and algorithmic approaches

Single-cell sequencing in genitourinary cancer is used to characterise lineage plasticity — particularly the transition towards neuroendocrine phenotype, which is a cell-state change that bulk profiling can miss entirely. Single-cell DNA analysis addresses clonal structure across metastatic sites, which is frequently discordant. Algorithm work includes DNA damage repair pathway scoring, resistance-alteration detection from serial plasma, and models that integrate imaging and molecular trajectories.

scDNA-seqscRNA-seqClonal reconstructionAlgorithm developmentPipeline engineering

Technical expertise

Decisions

Treatment decision questions

Questions worth raising with a treating team when a decision is being made:

  • Has HPV status been assessed?
  • Is the extent of inguinal nodal disease documented?
  • Has management at a centre with experience of this disease been considered?

Resistance

Resistance and recurrence questions

  • Has the disease been re-characterised at recurrence?

Trials

Clinical trial considerations

Trials are limited and concentrated at specialist centres.

Clinical trial matching

When a precision oncology review may help

A review is most useful where the standard pathway has been exhausted or where the picture is more complicated than a protocol accounts for — rare presentations, treatment resistance, complex or apparently contradictory molecular findings, or a decision between several defensible options.

The output is a structured analysis and a set of questions for the treating team. It is not treatment, and it does not replace the treating oncologist.

Educational information. Medical information on this page is educational. It is not a treatment guideline and should be discussed with your treating medical team.
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Talk it through before you decide

Monday to Saturday, 12:00 – 18:00 · by appointment at KPCIRC, Paschim Vihar. Remote review available for patients and clinicians elsewhere.

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