Dr. Bharat Kwatra Comp. Precision Oncology
Neuro-Oncology

Neuro-Oncology

Neuro-oncology covers primary central nervous system tumours, central nervous system metastases and the neurological complications of cancer. Its diagnostic framework is explicitly integrated, combining histology with molecular findings.

Disease categories

Major disease categories

  • Gliomas
  • Meningiomas
  • CNS lymphoma
  • Brain metastases
  • Leptomeningeal disease
  • Paediatric CNS tumours

Molecular

Molecular considerations

IDH status, 1p/19q co-deletion, MGMT promoter methylation and DNA methylation class are central to diagnosis and discussion in glioma.

Fig. 1 · Biomarker panel 6 markers

Markers commonly discussed in neuro-oncology

  • IDH1 / IDH2
  • 1p/19q co-deletion
  • MGMT promoter methylation
  • H3 K27M
  • BRAF V600E
  • Methylation class

Not exhaustive, and not every marker is assessed in every patient. Which of these is relevant depends on the individual case and should be discussed with the treating team.

Testing

Genomic testing considerations

Integrated diagnosis is standard. Methylation profiling is increasingly discussed for diagnostically difficult cases.

Germline

Germline considerations

Considered where a syndromic pattern is present.

Cancer genetics and hereditary risk

Molecular monitoring

ctDNA and liquid biopsy considerations

Cerebrospinal fluid analysis is the more promising route in central nervous system disease; plasma ctDNA is limited by the blood–brain barrier.

More on ctDNA

Single-cell & computation

Single-cell and algorithmic approaches

Single-cell sequencing in neuro-oncology is used to characterise the cellular hierarchy within a tumour, including the stem-like populations implicated in recurrence, and to describe the immune compartment that bulk profiling represents poorly. Single-cell DNA analysis addresses regional heterogeneity, which is pronounced in glioma. Algorithm work is dominated by DNA methylation classification, which has become one of the more reliable diagnostic tools in difficult central nervous system cases, alongside cerebrospinal fluid analysis methods.

scDNA-seqscRNA-seqClonal reconstructionAlgorithm developmentPipeline engineering

Technical expertise

In practice

What a review of this disease typically surfaces

Integrated diagnosis is the recurring gap — histology recorded without the molecular markers that the classification now requires. For brain metastases, the primary tumour's molecular profile is frequently unknown despite bearing directly on the options. Where the clinical course has been unexpected, methylation profiling has usually not been considered even where the diagnosis is genuinely in doubt.

Patterns observed across precision oncology case reviews. Every case differs; these are the questions worth checking, not conclusions about any individual patient.

Decisions

Treatment decision questions

Questions worth raising with a treating team when a decision is being made:

  • Is the diagnosis integrated, combining histology and molecular findings?
  • Has methylation profiling been considered for a difficult case?
  • For brain metastases, is the primary tumour’s molecular profile known?

Resistance

Resistance and recurrence questions

  • Has pseudoprogression been distinguished from true progression?

Trials

Clinical trial considerations

Molecular class is frequently determinative for eligibility.

Clinical trial matching

When a precision oncology review may help

A review is most useful where the standard pathway has been exhausted or where the picture is more complicated than a protocol accounts for — rare presentations, treatment resistance, complex or apparently contradictory molecular findings, or a decision between several defensible options.

The output is a structured analysis and a set of questions for the treating team. It is not treatment, and it does not replace the treating oncologist.

Educational information. Medical information on this page is educational. It is not a treatment guideline and should be discussed with your treating medical team.
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Monday to Saturday, 12:00 – 18:00 · by appointment at KPCIRC, Paschim Vihar. Remote review available for patients and clinicians elsewhere.

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